[Coral-List] Image-analysis software for counting

Matthew Johnston johnmatt at nova.edu
Fri Jun 12 11:00:02 EDT 2015

Hi Becca,

CPCe has a feature counter that allows you to categorically place points to produce counts.  The software is also useful for random sampling and subsequent analysis.  The software is free and available for download at the following website: http://cnso.nova.edu/tools-resources/software.html

Matt Johnston, PhD
Research Scientist
Data Manager, DEEPEND Consortium
Guy Harvey Research Institute
National Coral Reef Institute
Nova Southeastern University Oceanographic Center
8000 N. Ocean Drive, Dania, FL 33004 USA
johnmatt at nova.edu<mailto:johnmatt at nova.edu>
954.262.3641 (office, CoE #506)
954.205.8007 (cell)

On 6/12/2015 1:00 AM, coral-list-request at coral.aoml.noaa.gov<mailto:coral-list-request at coral.aoml.noaa.gov> wrote:

> Date: Wed, 10 Jun 2015 15:14:59 -0500

> From: Becca Maher <rlm6 at rice.edu<mailto:rlm6 at rice.edu>>

> Subject: [Coral-List] Image-analysis software for counting

> To: coral-list at coral.aoml.noaa.gov<mailto:coral-list at coral.aoml.noaa.gov>

> Message-ID:

>             <CAHn9id2Y551P7f8f5jECJWbDGgK2a=+iWDebKU22QAN2fHxg-A at mail.gmail.com<mailto:CAHn9id2Y551P7f8f5jECJWbDGgK2a=+iWDebKU22QAN2fHxg-A at mail.gmail.com>>

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> Dear Coral list,


> I am analysing images of long term monitoring quadrat photos for

> evidence of barnacles on a species of *Orbicella.* Any suggestions for

> image-analysis software that allows me to place a point on each of the

> bore holes (more than 100 on some colonies) and count the total points?


> Thanks!


> Becca Maher

> Ecology and Evolutionary Biology

> Rice University '16

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